What’s Included in Our Magento to Shopify Migration Service

Complete Data Transfer:


  • Customer accounts, product catalogs, and order histories migrated with 100% SKU integrity
  • URL mapping and 301 redirect implementation for SEO protection
  • Custom Shopify app development for unique B2B features
  • Liquid theme customization, maintaining sub-3-second load times

Enterprise Integration Services:


  • ERP reconnection (Infor, NetSuite, Epicor, SAP) with real-time sync
  • Payment gateway configuration across multiple processors
  • CRM and marketing automation integration
  • Third-party app setup and verification

Quality Assurance & Launch:


  • Automated validation scripts + manual review ensuring 99.95% accuracy
  • End-to-end functional, performance, and security testing
  • PCI DSS compliance verification
  • 30-day intensive post-launch monitoring

Atwix’s 11-Step Magento Shopify Migration Process

Step 1:

Feature Mapping

We audit your Magento installation across 150+ checkpoints, including custom modules, third-party extensions, B2B functionality, ERP integrations, and payment configurations. 

Deliverables: Complete functionality audit, Shopify capability gap analysis, and custom development specifications.

Step 2:

Data Structure Analysis

Step 2: Data Structure Analysis

Magento DataShopify SolutionComplexity
Customer hierarchiesTags/metafieldsHigh
Product variantsShopify variantsMedium
Pricing rulesScripts/FunctionsHigh
Context/SEO dataPages/redirectsMedium

Step 3:

Custom Development

We develop custom Shopify apps for features not available natively—including customer-specific pricing, quote-to-order workflows, bulk ordering interfaces, and approval hierarchies for B2B operations.

Step 4:

Data Transfer Execution

We execute our three-phase transfer protocol: 

  • Phase 1: Historical data migration (customers, products, orders, content)
  • Phase 2: Real-time sync establishment (ERP activation, live inventory, payment gateways)
  • Phase 3: Final cutover preparation (DNS, SSL, CDN configuration)

Your original Magento site remains operational throughout.

Step 5:

Verification & Quality Assurance

Rigorous verification ensures:

  • All URL redirects are tested and functional
  • 99.95% customer data accuracy 
  • 100% SKU integrity validation

Zero financial discrepancies through transaction reconciliation 

Step 6:

Theme Customization

Our Liquid programming experts customize Shopify themes with brand integration, B2B functionality displays, mobile optimization, and performance tuning, maintaining sub-3-second load times.

Step 7:

Payment Provider Configuration

  • We configure payment gateways with:
  • PCI DSS compliance verification 
  • Transaction testing across all workflows
  • Multiple payment processor setup 
  • B2B payment methods (purchase orders, net terms) 

Step 8:

Integration Configuration

We handle all enterprise integrations, especially our specialized ERP integration solution for Infor, NetSuite, Epicor, and SAP, ensuring 99.9% data accuracy rates.  Plus CRM connections and marketing automation tools.

Step 9:

Pre-Launch Testing

Comprehensive QA includes:

  • Security testing and vulnerability scans
  • User acceptance testing with your team
  • Functional testing across all user workflows
  • Performance testing under realistic load conditions

Step 10:

Domain Transfer & Go-Live

Coordinated DNS transfer with precision timing limits downtime to 2-4 hours.  Includes DNS record documentation, TTL reduction 48 hours prior, SSL certificate installation, and real-time monitoring during transfer.

Step 11:

Post-Launch Support

30-day intensive monitoring includes search engine crawl verification, performance validation, immediate issue resolution, plus optional ongoing support with 24/7 uptime monitoring and weekly performance audits.


Why Atwix for Your Magento to Shopify Migration?

Zero Data Loss, Protected SEO Rankings


Our Magento to Shopify migration service maintains virtually 100% data accuracy through automated validation scripts and manual quality assurance. We implement comprehensive 301 redirects, XML sitemap updates, and Google Search Console verification to maintain organic rankings.  While temporary fluctuations are normal, clients typically recover within 4-6 weeks.

B2B & ERP Specialists


We handle sophisticated requirements, including customer-specific pricing structures, approval hierarchies, and multi-location inventory management. Our Magento 2 migration service team develops custom Shopify apps that replicate your Magento capabilities. Unlike generic integration tools, our custom-built ERP solution connects seamlessly with Infor, NetSuite, Epicor, and SAP systems.

Industry-Aligned Development Standards


With 15+ years of platform expertise, Atwix delivers security-first development with automated testing coverage >95% and performance benchmarking against industry standards.  Our deep Shopify expertise ensures code quality that scales with your business.

Proven Track Record


Over 15 years of proven excellence delivering successful eCommerce projects globally across B2B retail, manufacturing, biotechnology, and logistics sectors. Our structured methodology eliminates common migration pitfalls while ensuring every feature, integration, and customization transfers smoothly.

Frequently Asked Questions

Got some questions? We’re here to answer. If you don’t see your question here, drop us a line with out Contact form.

How much does a Magento to Shopify migration cost?

Migration costs typically range from $15,000 to $75,000+, depending on data volume, custom functionality, and integration complexity. B2B merchants with complex catalog structures and real-time ERP sync usually invest $35,000-$100,000 in comprehensive migration services.

How long will my site be down?

Downtime is limited to 2-4 hours for the final domain transfer. Most work happens in a staging environment, allowing thorough testing before going live.

Will I lose my SEO rankings?

Our Magento to Shopify migration service includes proper URL mapping, 301 redirects, and metadata transfer to preserve SEO value. Temporary ranking fluctuations are normal but typically recover within 4-6 weeks.

Can you migrate complex ERP integrations?

Yes. Atwix specializes in ERP-powered migrations for Infor, NetSuite, Epicor, and SAP systems, ensuring uninterrupted real-time data synchronization after migration.